Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
Q13009 TIAM1 Rho guanine nucleotide exchange factor TIAM1;
T-lymphoma invasion and metastasis-inducing protein 1
 47.7 N/A, Not previously reported as mRNP 1.35
O00139 KIF2A KIF2, KNS2 Kinesin-like protein KIF2A;
Kinesin-2
 48.0 N/A, Not enriched over no 4sU control 2.28
Q69YH5 CDCA2 Cell division cycle-associated protein 2;
Recruits PP1 onto mitotic chromatin at anaphase protein
 48.0 N/A, Not enriched over no 4sU control 3.67
P47929 LGALS7 LGALS7B, PIG1; Galectin-7;
HKL-14;
PI7;
p53-induced gene 1 protein
 48.2 N/A, Not enriched over no 4sU control 1.36
Q15043 SLC39A14 KIAA0062, ZIP14 Metal cation symporter ZIP14;
LIV-1 subfamily of ZIP zinc transporter 4;
Solute carrier family 39 member 14;
Zrt- and Irt-like protein 14
 48.2 N/A, Not enriched over no 4sU control 3.24
Q96QE3 ATAD5 C17orf41, FRAG1 ATPase family AAA domain-containing protein 5;
Chromosome fragility-associated gene 1 protein
 48.2 N/A, Not enriched over no 4sU control 1.46
Q6RI45 BRWD3 Bromodomain and WD repeat-containing protein 3 48.3 N/A, Not enriched over no 4sU control 1.99
Q9BU19 ZNF692 Zinc finger protein 692;
AICAR responsive element binding protein
 48.3 N/A, Not previously reported as mRNP 1.23
Q9Y3F4 STRAP MAWD, UNRIP Serine-threonine kinase receptor-associated protein;
MAP activator with WD repeats;
UNR-interacting protein;
WD-40 repeat protein PT-WD
 48.3 N/A, Not enriched over no 4sU control 1.39
P31025 LCN1 VEGP Lipocalin-1;
Tear lipocalin;
Tear prealbumin;
von Ebner gland protein
 48.5 N/A, Not enriched over no 4sU control 0.83
Q9HAZ1 CLK4 Dual specificity protein kinase CLK4;
CDC-like kinase 4
 48.6 N/A, Not previously reported as mRNP 1.25
Q15014 MORF4L2 KIAA0026, MRGX Mortality factor 4-like protein 2;
MORF-related gene X protein;
Protein MSL3-2;
Transcription factor-like protein MRGX
 48.6 N/A, Not previously reported as mRNP 2.00
O95551 TDP2 AD-022, EAP2, TTRAP Tyrosyl-DNA phosphodiesterase 2;
5'-tyrosyl-DNA phosphodiesterase;
ETS1-associated protein 2;
ETS1-associated protein II;
TRAF and TNF receptor-associated protein;
Tyrosyl-RNA phosphodiesterase;
VPg unlinkase
 48.7 N/A, Not previously reported as mRNP 2.00
Q9UBB9 TFIP11 HSPC006, STIP Tuftelin-interacting protein 11;
Septin and tuftelin-interacting protein 1
 48.9 N/A, Not previously reported as mRNP 1.79
P08670 VIM Vimentin 49.2 N/A, Quantification quality is not sufficient 2.31
Q8N1N4 KRT78 K5B, KB40 Keratin, type II cytoskeletal 78;
Cytokeratin-78;
Keratin-5b;
Keratin-78;
Type-II keratin Kb40
 49.2 N/A, Not enriched over no 4sU control 1.53
Q14019 COTL1 CLP Coactosin-like protein 49.3 N/A, Not previously reported as mRNP 1.51
P05783 KRT18 CYK18, PIG46 Keratin, type I cytoskeletal 18;
Cell proliferation-inducing gene 46 protein;
Cytokeratin-18;
Keratin-18
 49.7 N/A, Not enriched over no 4sU control 1.94
O95391 SLU7 Pre-mRNA-splicing factor SLU7 49.7 N/A, Not previously reported as mRNP 1.71
P61006 RAB8A MEL, RAB8 Ras-related protein Rab-8A;
Oncogene c-mel
 49.8 N/A, Not enriched over no 4sU control 2.33