Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
P08779 KRT16 KRT16A Keratin, type I cytoskeletal 16;
Cytokeratin-16;
Keratin-16
 35.6 N/A, Not enriched over no 4sU control 0.75
Q92564 DCUN1D4 KIAA0276 DCN1-like protein 4;
DCUN1 domain-containing protein 4;
Defective in cullin neddylation protein 1-like protein 4
 35.7 N/A, Not enriched over no 4sU control 2.01
Q9BW60 ELOVL1 CGI-88, SSC1 Elongation of very long chain fatty acids protein 1;
3-keto acyl-CoA synthase ELOVL1;
ELOVL fatty acid elongase 1;
Very long chain 3-ketoacyl-CoA synthase 1;
Very long chain 3-oxoacyl-CoA synthase 1
 35.9 N/A, Not previously reported as mRNP 1.27
Q9UL40 ZNF346 JAZ Zinc finger protein 346;
Just another zinc finger protein
 36.1 N/A, Not enriched over no 4sU control 1.95
Q93077 HIST1H2AC H2AFL Histone H2A type 1-C;
H2A-clustered histone 6;
Histone H2A/l
 36.4 N/A, Considered as contaminant protein 1.47
Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 36.4 N/A, Not enriched over no 4sU control 2.09
A8MWD9 SNRPGP15 Putative small nuclear ribonucleoprotein G-like protein 15 36.9 N/A, Quantification quality is not sufficient 0.97
P35251 RFC1 RFC140 Replication factor C subunit 1;
Activator 1 140 kDa subunit;
Activator 1 large subunit;
Activator 1 subunit 1;
DNA-binding protein PO-GA;
Replication factor C 140 kDa subunit;
Replication factor C large subunit
 37.5 N/A, Not enriched over no 4sU control 2.34
Q9H0U3 MAGT1 IAG2, PSEC0084, UNQ628/PRO1244 Magnesium transporter protein 1;
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1;
Implantation-associated protein
 37.5 N/A, Not previously reported as mRNP 1.44
Q7Z5J4 RAI1 KIAA1820 Retinoic acid-induced protein 1 37.6 N/A, Not previously reported as mRNP 1.59
P23284 PPIB CYPB Peptidyl-prolyl cis-trans isomerase B;
CYP-S1;
Cyclophilin B;
Rotamase B;
S-cyclophilin
 38.0 N/A, Not enriched over no 4sU control 1.21
O60814 HIST1H2BK H2BFT, HIRIP1 Histone H2B type 1-K;
HIRA-interacting protein 1
 38.0 N/A, Quantification quality is not sufficient 1.27
Q8IXL6 FAM20C DMP4 Extracellular serine/threonine protein kinase FAM20C;
Dentin matrix protein 4;
Golgi casein kinase;
Golgi-enriched fraction casein kinase
 38.0 N/A, Not enriched over no 4sU control 1.68
Q8WTP8 AEN ISG20L1, SBBI58 Apoptosis-enhancing nuclease;
Interferon-stimulated 20 kDa exonuclease-like 1
 38.6 N/A, Not previously reported as mRNP 1.27
Q15629 TRAM1 TRAM Translocating chain-associated membrane protein 1 38.9 N/A, Not enriched over no 4sU control 2.16
Q8TAP9 MPLKIP C7orf11, TTDN1 M-phase-specific PLK1-interacting protein;
TTD non-photosensitive 1 protein
 39.0 N/A, Not previously reported as mRNP 1.47
P24311 COX7B Cytochrome c oxidase subunit 7B, mitochondrial;
Cytochrome c oxidase polypeptide VIIb
 39.2 N/A, Not previously reported as mRNP 1.15
Q8WYQ5 DGCR8 C22orf12, DGCRK6, LP4941 Microprocessor complex subunit DGCR8;
DiGeorge syndrome critical region 8
 39.5 N/A, Not previously reported as mRNP 1.29
P36873 PPP1CC Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;
Protein phosphatase 1C catalytic subunit
 39.8 N/A, Not enriched over no 4sU control 2.84
Q8TB61 SLC35B2 PAPST1, PSEC0149 Adenosine 3'-phospho 5'-phosphosulfate transporter 1;
PAPS transporter 1;
Putative MAPK-activating protein PM15;
Putative NF-kappa-B-activating protein 48;
Solute carrier family 35 member B2
 40.0 N/A, Not previously reported as mRNP 1.14