Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
P26196 DDX6 HLR2, RCK Probable ATP-dependent RNA helicase DDX6;
ATP-dependent RNA helicase p54;
DEAD box protein 6;
Oncogene RCK
 101.3 N/A, Not enriched over no 4sU control 3.11
Q9BY44 EIF2A CDA02, MSTP004, MSTP089 Eukaryotic translation initiation factor 2A;
65 kDa eukaryotic translation initiation factor 2A;
Eukaryotic translation initiation factor 2A, N-terminally processed
 101.6 N/A, Not enriched over no 4sU control 3.53
P02461 COL3A1 Collagen alpha-1(III) chain 103.7 N/A, Not enriched over no 4sU control 1.94
Q13442 PDAP1 HASPP28 28 kDa heat- and acid-stable phosphoprotein;
PDGF-associated protein;
PDGFA-associated protein 1
 105.8 N/A, Not enriched over no 4sU control 4.64
Q86UE4 MTDH AEG1, LYRIC Protein LYRIC;
3D3/LYRIC;
Astrocyte elevated gene-1 protein;
Lysine-rich CEACAM1 co-isolated protein;
Metadherin;
Metastasis adhesion protein
 107.5 N/A, Not enriched over no 4sU control 7.52
O75179 ANKRD17 GTAR, KIAA0697 Ankyrin repeat domain-containing protein 17;
Gene trap ankyrin repeat protein;
Serologically defined breast cancer antigen NY-BR-16
 109.6 N/A, Not enriched over no 4sU control 2.31
Q14055 COL9A2 Collagen alpha-2(IX) chain 109.6 N/A, Quantification quality is not sufficient 3.89
O15258 RER1 Protein RER1 110.3 N/A, Not enriched over no 4sU control 1.48
E9PRG8 C11orf98 Uncharacterized protein C11orf98 114.7 N/A, Not previously reported as mRNP 1.01
P62861 FAU Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein;
FAU ubiquitin like and ribosomal protein S30 fusion;
Ubiquitin-like protein FUBI;
Small ribosomal subunit protein eS30;
40S ribosomal protein S30
 117.1 N/A, Quantification quality is not sufficient 6.46
P12035 KRT3 Keratin, type II cytoskeletal 3;
65 kDa cytokeratin;
Cytokeratin-3;
Keratin-3;
Type-II keratin Kb3
 120.0 N/A, Not enriched over no 4sU control 1.40
Q8N9V6 ANKRD53 Ankyrin repeat domain-containing protein 53 177.5 N/A, Not enriched over no 4sU control 2.05
Q5T749 KPRP C1orf45 Keratinocyte proline-rich protein 182.9 N/A, Not enriched over no 4sU control 1.95
Q9Y3D9 MRPS23 CGI-138, HSPC329 Small ribosomal subunit protein mS23;
28S ribosomal protein S23, mitochondrial
 184.1 N/A, Not enriched over no 4sU control 1.95
P35590 TIE1 TIE Tyrosine-protein kinase receptor Tie-1 197.7 N/A, Not enriched over no 4sU control 1.29
P05089 ARG1 Arginase-1;
Liver-type arginase;
Type I arginase
 211.1 N/A, Not enriched over no 4sU control 2.03
Q9UHB9 SRP68 Signal recognition particle subunit SRP68;
Signal recognition particle 68 kDa protein
 213.6 N/A, Quantification quality is not sufficient 3.85
Q02413 DSG1 CDHF4 Desmoglein-1;
Cadherin family member 4;
Desmosomal glycoprotein 1;
Pemphigus foliaceus antigen
 213.9 N/A, Not enriched over no 4sU control 0.82
Q86TG7 PEG10 EDR, KIAA1051, MAR2, MART2, MEF3L1, RGAG3 Retrotransposon-derived protein PEG10;
Embryonal carcinoma differentiation-regulated protein;
Mammalian retrotransposon-derived protein 2;
Myelin expression factor 3-like protein 1;
Paternally expressed gene 10 protein;
Retrotransposon gag domain-containing protein 3;
Retrotransposon-derived gag-like polyprotein;
Ty3/Gypsy-like protein
 225.4 N/A, Not enriched over no 4sU control 3.03
A6NMY6 ANXA2P2 ANX2L2, ANX2P2, LPC2B Putative annexin A2-like protein;
Annexin A2 pseudogene 2;
Lipocortin II pseudogene
 233.4 N/A, Not enriched over no 4sU control 2.62