Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
P61106 RAB14 Ras-related protein Rab-14 50.0 N/A, Not enriched over no 4sU control 1.46
Q96I51 RCC1L WBSCR16 RCC1-like G exchanging factor-like protein;
Williams-Beuren syndrome chromosomal region 16 protein
 50.0 N/A, Not enriched over no 4sU control 3.73
P0CG12 CHTF8 DERPC Decreased expression in renal and prostate cancer protein 50.1 N/A, Not previously reported as mRNP 1.23
P49916 LIG3 DNA ligase 3;
DNA ligase III;
Polydeoxyribonucleotide synthase [ATP] 3
 50.2 N/A, Not previously reported as mRNP 1.19
O60841 EIF5B IF2, KIAA0741 Eukaryotic translation initiation factor 5B;
Translation initiation factor IF-2
 50.3 N/A, Quantification quality is not sufficient 3.18
P52746 ZNF142 KIAA0236 Zinc finger protein 142 50.3 N/A, Not previously reported as mRNP 2.29
Q5XG87 TENT4A PAPD7, POLS, TRF4 Terminal nucleotidyltransferase 4A;
DNA polymerase sigma;
LAK-1;
Non-canonical poly(A) RNA polymerase PAPD7;
PAP-associated domain-containing protein 7;
TRAMP-like complex polyadenylate polymerase;
Terminal guanylyltransferase;
Terminal uridylyltransferase 5;
Topoisomerase-related function protein 4-1
 50.5 N/A, Not previously reported as mRNP 3.07
P10412 HIST1H1E H1F4 Histone H1.4;
Histone H1b;
Histone H1s-4
 50.6 N/A, Considered as contaminant protein 1.38
O75417 POLQ POLH DNA polymerase theta;
DNA polymerase eta
 50.9 N/A, Not enriched over no 4sU control 4.78
P07737 PFN1 Profilin-1;
Epididymis tissue protein Li 184a;
Profilin I
 51.0 N/A, Not enriched over no 4sU control 1.72
A2AJT9 BCLAF3 CXorf23 BCLAF1 and THRAP3 family member 3 51.2 N/A, Not previously reported as mRNP 1.82
Q96FX7 TRMT61A C14orf172, TRM61 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A;
mRNA methyladenosine-N(1)-methyltransferase catalytic subunit TRMT61A;
tRNA(m1A58)-methyltransferase subunit TRMT61A
 51.3 N/A, Not enriched over no 4sU control 1.19
O15504 NUPL2 CG1 Nucleoporin NUP42;
NLP-1;
NUP42 homolog;
Nucleoporin hCG1;
Nucleoporin-42;
Nucleoporin-like protein 2
 51.5 N/A, Not enriched over no 4sU control 2.51
Q9NV72 ZNF701 Zinc finger protein 701 51.8 N/A, Not enriched over no 4sU control 1.54
O60716 CTNND1 KIAA0384 Catenin delta-1;
Cadherin-associated Src substrate;
p120 catenin;
p120(cas)
 51.9 N/A, Not enriched over no 4sU control 2.03
P38432 COIL CLN80 Coilin;
p80-coilin
 52.0 N/A, Not previously reported as mRNP 2.13
Q03164 KMT2A ALL1, CXXC7, HRX, HTRX, MLL, MLL1, TRX1 Histone-lysine N-methyltransferase 2A;
ALL-1;
CXXC-type zinc finger protein 7;
Cysteine methyltransferase KMT2A;
Myeloid/lymphoid or mixed-lineage leukemia;
Myeloid/lymphoid or mixed-lineage leukemia protein 1;
Trithorax-like protein;
Zinc finger protein HRX;
MLL cleavage product N320;
N-terminal cleavage product of 320 kDa;
MLL cleavage product C180;
C-terminal cleavage product of 180 kDa
 52.0 N/A, Not previously reported as mRNP 1.60
Q9GZZ8 LACRT Extracellular glycoprotein lacritin 52.0 N/A, Not enriched over no 4sU control 0.81
Q969Q0 RPL36AL Ribosomal protein eL42-like;
60S ribosomal protein L36a-like;
Large ribosomal subunit protein eL42-like
 52.3 N/A, Not previously reported as mRNP 1.99
P31327 CPS1 Carbamoyl-phosphate synthase [ammonia], mitochondrial;
Carbamoyl-phosphate synthetase I
 52.4 N/A, Not previously reported as mRNP 1.58