Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
Q9GZP8 IMUP C19orf33 Immortalization up-regulated protein;
Hepatocyte growth factor activator inhibitor type 2-related small protein
 59.0 N/A, Quantification quality is not sufficient 1.42
P48730 CSNK1D HCKID Casein kinase I isoform delta;
Tau-protein kinase CSNK1D
 59.3 N/A, Not previously reported as mRNP 1.53
Q9P2E9 RRBP1 KIAA1398 Ribosome-binding protein 1;
180 kDa ribosome receptor homolog;
ES/130-related protein;
Ribosome receptor protein
 60.4 N/A, Quantification quality is not sufficient 3.74
Q8IXY8 PPIL6 Probable inactive peptidyl-prolyl cis-trans isomerase-like 6;
Cyclophilin-like protein PPIL6;
Rotamase PPIL6
 60.7 N/A, Not enriched over no 4sU control 1.02
Q9NSI2 FAM207A C21orf70, PRED56 Ribosome biogenesis protein SLX9 homolog 60.9 N/A, Not previously reported as mRNP 0.98
O00488 ZNF593 ZT86 Zinc finger protein 593;
Zinc finger protein T86
 61.5 N/A, Not previously reported as mRNP 1.85
Q9HD42 CHMP1A CHMP1, KIAA0047, PCOLN3, PRSM1 Charged multivesicular body protein 1a;
Chromatin-modifying protein 1a;
Vacuolar protein sorting-associated protein 46-1
 61.7 N/A, Not previously reported as mRNP 2.12
Q96RP9 GFM1 EFG, EFG1, GFM Elongation factor G, mitochondrial;
Elongation factor G 1, mitochondrial;
Elongation factor G1
 61.9 N/A, Not enriched over no 4sU control 2.98
Q9Y6Q2 STON1 SALF, SBLF, STN1 Stonin-1;
Stoned B-like factor
 61.9 N/A, Not enriched over no 4sU control 1.93
Q8NE71 ABCF1 ABC50 ATP-binding cassette sub-family F member 1;
ATP-binding cassette 50;
TNF-alpha-stimulated ABC protein
 62.1 N/A, Quantification quality is not sufficient 3.98
Q9BYD3 MRPL4 CDABP0091, CGI-28 Large ribosomal subunit protein uL4m;
39S ribosomal protein L4, mitochondrial
 62.2 N/A, Not enriched over no 4sU control 2.37
Q96SZ6 CDK5RAP1 C20orf34, CGI-05, HSPC167 Mitochondrial tRNA methylthiotransferase CDK5RAP1;
CDK5 activator-binding protein C42;
CDK5 regulatory subunit-associated protein 1;
mt-tRNA-2-methylthio-N6-dimethylallyladenosine synthase;
mt-tRNA-N6-(dimethylallyl)adenosine(37) methylthiotransferase
 62.5 N/A, Not enriched over no 4sU control 3.10
A8MTJ3 GNAT3 Guanine nucleotide-binding protein G(t) subunit alpha-3;
Gustducin alpha-3 chain
 63.5 N/A, Not enriched over no 4sU control 2.00
P62318 SNRPD3 Small nuclear ribonucleoprotein Sm D3;
snRNP core protein D3
 63.6 N/A, Quantification quality is not sufficient 1.33
Q14674 ESPL1 ESP1, KIAA0165 Separin;
Caspase-like protein ESPL1;
Extra spindle poles-like 1 protein;
Separase
 63.6 N/A, Not enriched over no 4sU control 3.48
O75131 CPNE3 CPN3, KIAA0636 Copine-3;
Copine III
 63.9 N/A, Not enriched over no 4sU control 2.74
Q01518 CAP1 CAP Adenylyl cyclase-associated protein 1 64.0 N/A, Not enriched over no 4sU control 2.43
Q13569 TDG G/T mismatch-specific thymine DNA glycosylase;
Thymine-DNA glycosylase
 64.2 N/A, Not previously reported as mRNP 2.08
Q9NR48 ASH1L KIAA1420, KMT2H Histone-lysine N-methyltransferase ASH1L;
ASH1-like protein;
Absent small and homeotic disks protein 1 homolog;
Lysine N-methyltransferase 2H
 65.2 N/A, Not enriched over no 4sU control 1.35
Q15046 KARS KIAA0070 Lysine--tRNA ligase;
Lysyl-tRNA synthetase
 65.5 N/A, Not enriched over no 4sU control 6.26