Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
P61019 RAB2A RAB2 Ras-related protein Rab-2A 66.0 N/A, Not enriched over no 4sU control 1.81
P62805 HIST1H4A H4/A, H4/B, H4/C, H4/D, H4/E, H4/G, H4/H, H4/I, H4/J, H4/K, H4/M, H4/N, H4/O, H4F2, H4FA;, H4FB;, H4FC;, H4FD;, H4FE;, H4FG;, H4FH;, H4FI;, H4FJ;, H4FK;, H4FM;, H4FN, H4FO;, HIST1H4B, HIST1H4C, HIST1H4D, HIST1H4E, HIST1H4F, HIST1H4H, HIST1H4I, HIST1H4J, HIST1H4K, HIST1H4L, HIST2H4;, HIST2H4A, HIST2H4B, HIST4H4 Histone H4 66.2 N/A, Considered as contaminant protein 2.16
Q9UNZ5 C19orf53 HSPC023 Leydig cell tumor 10 kDa protein homolog 66.3 N/A, Not previously reported as mRNP 1.60
P52701 MSH6 GTBP DNA mismatch repair protein Msh6;
G/T mismatch-binding protein;
MutS protein homolog 6;
MutS-alpha 160 kDa subunit
 68.7 N/A, Not enriched over no 4sU control 1.30
Q7Z333 SETX ALS4, KIAA0625, SCAR1 Probable helicase senataxin;
Amyotrophic lateral sclerosis 4 protein;
SEN1 homolog;
Senataxin
 69.0 N/A, Quantification quality is not sufficient 4.52
Q8N257 HIST3H2BB Histone H2B type 3-B;
H2B type 12;
H2B-clustered histone 26;
H2B.U histone 1
 69.1 N/A, Not enriched over no 4sU control 1.36
P68431 HIST1H3A H3FA;, H3FB;, H3FC;, H3FD;, H3FF;, H3FH;, H3FI;, H3FJ, H3FK;, H3FL;, HIST1H3B, HIST1H3C, HIST1H3D, HIST1H3E, HIST1H3F, HIST1H3G, HIST1H3H, HIST1H3I, HIST1H3J Histone H3.1;
Histone H3/a;
Histone H3/b;
Histone H3/c;
Histone H3/d;
Histone H3/f;
Histone H3/h;
Histone H3/i;
Histone H3/j;
Histone H3/k;
Histone H3/l
 69.6 N/A, Not enriched over no 4sU control 1.27
Q9H8Y5 ANKZF1 ZNF744 tRNA endonuclease ANKZF1;
Ankyrin repeat and zinc finger domain-containing protein 1;
Zinc finger protein 744
 69.7 N/A, Not enriched over no 4sU control 3.66
Q9ULV3 CIZ1 LSFR1, NP94, ZNF356 Cip1-interacting zinc finger protein;
CDKN1A-interacting zinc finger protein 1;
Nuclear protein NP94;
Zinc finger protein 356
 71.4 N/A, Not enriched over no 4sU control 1.60
Q9NU22 MDN1 KIAA0301 Midasin;
Dynein-related AAA-ATPase MDN1;
MIDAS-containing protein
 75.1 N/A, Not enriched over no 4sU control 1.74
Q9BV38 WDR18 WD repeat-containing protein 18 75.9 N/A, Not enriched over no 4sU control 3.13
P82914 MRPS15 DC37, RPMS15 Small ribosomal subunit protein uS15m;
28S ribosomal protein S15, mitochondrial
 77.4 N/A, Quantification quality is not sufficient 4.64
P13639 EEF2 EF2 Elongation factor 2 78.3 N/A, Quantification quality is not sufficient 4.28
Q15434 RBMS2 SCR3 RNA-binding motif, single-stranded-interacting protein 2;
Suppressor of CDC2 with RNA-binding motif 3
 82.1 N/A, Quantification quality is not sufficient 2.27
Q14258 TRIM25 EFP, RNF147, ZNF147 E3 ubiquitin/ISG15 ligase TRIM25;
Estrogen-responsive finger protein;
RING finger protein 147;
RING-type E3 ubiquitin transferase;
RING-type E3 ubiquitin transferase TRIM25;
Tripartite motif-containing protein 25;
Ubiquitin/ISG15-conjugating enzyme TRIM25;
Zinc finger protein 147
 84.6 N/A, Not enriched over no 4sU control 4.46
P60866 RPS20 Small ribosomal subunit protein uS10;
40S ribosomal protein S20
 86.8 N/A, Quantification quality is not sufficient 4.19
Q9HC36 MRM3 HC90, RNMTL1 rRNA methyltransferase 3, mitochondrial;
16S rRNA (guanosine(1370)-2'-O)-methyltransferase;
16S rRNA [Gm1370] 2'-O-methyltransferase;
RNA methyltransferase-like protein 1
 94.4 N/A, Not enriched over no 4sU control 1.91
P81605 DCD AIDD, DSEP Dermcidin;
Preproteolysin;
Survival-promoting peptide;
DCD-1
 99.4 N/A, Not enriched over no 4sU control 2.05
Q8NCA5 FAM98A Protein FAM98A 99.8 N/A, Quantification quality is not sufficient 4.37
P29372 MPG AAG, ANPG, MID1 DNA-3-methyladenine glycosylase;
3-alkyladenine DNA glycosylase;
3-methyladenine DNA glycosidase;
ADPG;
N-methylpurine-DNA glycosylase
 100.5 N/A, Not enriched over no 4sU control 3.12