Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
Q8N9Q2 SREK1IP1 P18SRP, SFRS12IP1 Protein SREK1IP1;
SFRS12-interacting protein 1;
SREK1-interacting protein 1;
Splicing regulatory protein of 18 kDa
 44.9 N/A, Not previously reported as mRNP 2.78
Q9H9J2 MRPL44 Large ribosomal subunit protein mL44;
39S ribosomal protein L44, mitochondrial
 44.9 N/A, Not enriched over no 4sU control 3.02
P16401 HIST1H1B H1F5 Histone H1.5;
Histone H1a;
Histone H1b;
Histone H1s-3
 45.4 N/A, Considered as contaminant protein 1.54
P11166 SLC2A1 GLUT1 Solute carrier family 2, facilitated glucose transporter member 1;
Glucose transporter type 1, erythrocyte/brain;
HepG2 glucose transporter
 45.8 N/A, Not previously reported as mRNP 1.56
P68363 TUBA1B Tubulin alpha-1B chain;
Alpha-tubulin ubiquitous;
Tubulin K-alpha-1;
Tubulin alpha-ubiquitous chain;
Detyrosinated tubulin alpha-1B chain
 45.8 N/A, Quantification quality is not sufficient 3.08
P51149 RAB7A RAB7 Ras-related protein Rab-7a 46.3 N/A, Not enriched over no 4sU control 1.83
Q96NY9 MUS81 Crossover junction endonuclease MUS81 46.3 N/A, Not previously reported as mRNP 1.20
Q9BW85 YJU2 CCDC94 Splicing factor YJU2;
Coiled-coil domain-containing protein 94
 46.5 N/A, Not previously reported as mRNP 1.14
Q6P1J9 CDC73 C1orf28, HRPT2 Parafibromin;
Cell division cycle protein 73 homolog;
Hyperparathyroidism 2 protein
 46.6 N/A, Not previously reported as mRNP 1.59
P11169 SLC2A3 GLUT3 Solute carrier family 2, facilitated glucose transporter member 3;
Glucose transporter type 3, brain
 46.7 N/A, Not previously reported as mRNP 1.34
Q8NBI5 SLC43A3 PSEC0252 Equilibrative nucleobase transporter 1;
Protein FOAP-13;
Solute carrier family 43 member 3
 46.8 N/A, Not previously reported as mRNP 1.57
Q9H5V9 CXorf56 STING ER exit protein 46.8 N/A, Not enriched over no 4sU control 1.36
Q9Y3E0 GOLT1B CGI-141, GCT2, GOT1A, HDCMA39P, UNQ432/PRO793 Vesicle transport protein GOT1B;
Germ cell tumor 2;
Golgi transport 1 homolog B;
Putative NF-kappa-B-activating protein 470;
hGOT1a
 46.9 N/A, Not previously reported as mRNP 1.31
O14880 MGST3 Glutathione S-transferase 3, mitochondrial;
Glutathione peroxidase MGST3;
LTC4 synthase MGST3
 47.0 N/A, Not previously reported as mRNP 1.12
P16403 HIST1H1C H1F2 Histone H1.2;
Histone H1c;
Histone H1d;
Histone H1s-1
 47.1 N/A, Considered as contaminant protein 1.38
P62304 SNRPE Small nuclear ribonucleoprotein E;
Sm protein E
 47.3 N/A, Quantification quality is not sufficient 2.43
O95696 BRD1 BRL, BRPF2 Bromodomain-containing protein 1;
BR140-like protein;
Bromodomain and PHD finger-containing protein 2
 47.4 N/A, Not enriched over no 4sU control 1.67
Q8WYP5 AHCTF1 ELYS, MSTP108, TMBS62 Protein ELYS;
Embryonic large molecule derived from yolk sac;
Protein MEL-28;
Putative AT-hook-containing transcription factor 1
 47.4 N/A, Not enriched over no 4sU control 1.65
Q9HC52 CBX8 PC3, RC1 Chromobox protein homolog 8;
Polycomb 3 homolog;
Rectachrome 1
 47.5 N/A, Not previously reported as mRNP 1.89
Q6DD87 ZNF787 Zinc finger protein 787;
TTF-I-interacting peptide 20
 47.6 N/A, Not previously reported as mRNP 1.46