Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
P47756 CAPZB F-actin-capping protein subunit beta;
CapZ beta
 40.1 N/A, Not enriched over no 4sU control 2.42
Q7Z7F0 KHDC4 BLOM7, KIAA0907, SNORA80EHG KH homology domain-containing protein 4;
Brings lots of money 7;
Pre-mRNA splicing factor protein KHDC4
 40.1 N/A, Not previously reported as mRNP 1.40
P16615 ATP2A2 ATP2B Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;
Calcium pump 2;
Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform;
Endoplasmic reticulum class 1/2 Ca(2+) ATPase
 40.2 N/A, Not enriched over no 4sU control 1.98
P51572 BCAP31 BAP31, DXS1357E B-cell receptor-associated protein 31;
6C6-AG tumor-associated antigen;
Protein CDM;
p28
 40.3 N/A, Not enriched over no 4sU control 1.85
Q9UBG3 CRNN C1orf10, DRC1, PDRC1, SEP53 Cornulin;
53 kDa putative calcium-binding protein;
53 kDa squamous epithelial-induced stress protein;
58 kDa heat shock protein;
Squamous epithelial heat shock protein 53;
Tumor-related protein
 40.3 N/A, Not enriched over no 4sU control 0.47
P40926 MDH2 Malate dehydrogenase, mitochondrial 40.6 N/A, Not enriched over no 4sU control 2.11
Q96L73 NSD1 ARA267, KMT3B Histone-lysine N-methyltransferase, H3 lysine-36 specific;
Androgen receptor coactivator 267 kDa protein;
Androgen receptor-associated protein of 267 kDa;
H3-K36-HMTase;
Lysine N-methyltransferase 3B;
Nuclear receptor-binding SET domain-containing protein 1
 40.6 N/A, Not previously reported as mRNP 1.52
Q8WXA9 SREK1 SFRS12, SRRP86 Splicing regulatory glutamine/lysine-rich protein 1;
Serine/arginine-rich-splicing regulatory protein 86;
Splicing factor, arginine/serine-rich 12;
Splicing regulatory protein 508
 40.7 N/A, Not enriched over no 4sU control 1.96
Q969H8 MYDGF C19orf10 Myeloid-derived growth factor 40.7 N/A, Not previously reported as mRNP 1.30
Q96EE3 SEH1L SEC13L, SEH1 Nucleoporin SEH1;
GATOR complex protein SEH1;
Nup107-160 subcomplex subunit SEH1;
SEC13-like protein
 40.9 N/A, Not previously reported as mRNP 1.26
P10155 TROVE2 RO60, SSA2 RNA-binding protein RO60;
60 kDa SS-A/Ro ribonucleoprotein;
Ro 60 kDa autoantigen;
Sjoegren syndrome antigen A2;
Sjoegren syndrome type A antigen;
TROVE domain family member 2
 41.0 N/A, Quantification quality is not sufficient 2.62
Q8TAX7 MUC7 MG2 Mucin-7;
Apo-MG2;
Salivary mucin-7
 41.1 N/A, Not enriched over no 4sU control 0.86
Q9NZ63 C9orf78 HCA59 Splicing factor C9orf78;
Hepatocellular carcinoma-associated antigen 59
 41.2 N/A, Not enriched over no 4sU control 1.28
Q9UMS4 PRPF19 NMP200, PRP19, SNEV Pre-mRNA-processing factor 19;
Nuclear matrix protein 200;
PRP19/PSO4 homolog;
RING-type E3 ubiquitin transferase PRP19;
Senescence evasion factor
 41.2 N/A, Not enriched over no 4sU control 0.92
Q6PIY7 TENT2 GLD2, PAPD4 Poly(A) RNA polymerase GLD2;
PAP-associated domain-containing protein 4;
Terminal nucleotidyltransferase 2;
Terminal uridylyltransferase 2
 41.4 N/A, Not previously reported as mRNP 1.56
Q8TEW8 PARD3B ALS2CR19, PAR3B, PAR3L Partitioning defective 3 homolog B;
Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 19 protein;
PAR3-beta;
Partitioning defective 3-like protein
 41.5 N/A, Not enriched over no 4sU control 1.56
Q96K58 ZNF668 Zinc finger protein 668 41.5 N/A, Not previously reported as mRNP 1.26
Q5TAX3 TUT4 KIAA0191, ZCCHC11 Terminal uridylyltransferase 4;
Zinc finger CCHC domain-containing protein 11
 41.6 N/A, Quantification quality is not sufficient 5.52
Q8WUA4 GTF3C2 KIAA0011 General transcription factor 3C polypeptide 2;
TF3C-beta;
Transcription factor IIIC 110 kDa subunit;
Transcription factor IIIC subunit beta
 41.6 N/A, Not previously reported as mRNP 2.11
Q9Y333 LSM2 C6orf28, G7B U6 snRNA-associated Sm-like protein LSm2;
Protein G7b;
Small nuclear ribonuclear protein D homolog;
snRNP core Sm-like protein Sm-x5
 41.6 N/A, Not enriched over no 4sU control 2.88