RAB1A
UniProt Accession | P62820 UniProt 🔗 |
---|---|
Synonyms | RAB1 |
UniProt protein names | Ras-related protein Rab-1A;YPT1-related protein |
Peak binding time (min) | 45.1 |
Cluster | III |
Cluster membership (corr) | 0.990 |
Peak broadness (1 / std of log2 intensities) | 1.94 |
Cluster expected from GO | IV |
Subcellular localization (Human Protein Atlas) | Cytosol;Endoplasmic reticulum |
Subcellular localization (Human Cell Map) | NMF result: mitochondrial outer membrane, peroxisome, SAFE result: no prediction |
RMSE (expected - observed) | 0.47 |
Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of RAB1A in mRNP (BioGRID)
Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
---|---|---|---|---|---|---|---|
Q9NZ01 | TECR | 43.4 | III | Endoplasmic reticulum | NMF result: mitochondrial outer membrane, peroxisome, SAFE result: - | 1 | 1 |
Q13283 | G3BP1 | 220.8 | VII | Cytosol | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: cytoplasmic ribonucleoprotein granule | 1 | 1 |
Q15717 | ELAVL1 | 46.3 | III | Cytosol;Nucleoli;Nucleus | NMF result: miscellaneous, SAFE result: paraspeckles | 1 | 1 |
Q96AE4 | FUBP1 | 36.8 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
Q69YN4 | VIRMA | 0.0 | I | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
P07195 | LDHB | 56.6 | IV | Cytosol | NMF result: miscellaneous, SAFE result: no prediction | 1 | 1 |
Q08945 | SSRP1 | 0.0 | I | Cytosol;Nucleus | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |
P26599 | PTBP1 | 46.5 | III | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
Q16658 | FSCN1 | 42.1 | II | Cytosol;Plasma membrane | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
P27694 | RPA1 | 45.5 | III | Nucleoplasm | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |
P51991 | HNRNPA3 | 43.2 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
Q9C0B0 | UNK | 88.4 | VI | Cytoplasmic bodies;Cytosol | NMF result: centrosome, SAFE result: centrosome enriched, P-body enriched | 1 | 1 |
P09651 | HNRNPA1 | 43.1 | II | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
Q00325 | SLC25A3 | 44.7 | II | Mitochondria | NMF result: plasma membrane, SAFE result: - | 1 | 1 |
P00338 | LDHA | 44.4 | III | Cytosol;Vesicles | NMF result: miscellaneous, SAFE result: no prediction | 1 | 1 |