Selected RBPs (up to 12):
Nothing is selected
All Cluster I Cluster II Cluster III Cluster IV Cluster V Cluster VI Cluster VII
Master protein UniProt Gene symbol Synonyms UniProt protein names Peak binding time (min) Cluster Peak broadness
O75319 DUSP11 PIR1 RNA/RNP complex-1-interacting phosphatase;
Dual specificity protein phosphatase 11;
Phosphatase that interacts with RNA/RNP complex 1
 40.5 II 1.19
Q8NEF9 SRFBP1 Serum response factor-binding protein 1;
SRF-dependent transcription regulation-associated protein;
p49/STRAP
 40.7 II 0.88
P31943 HNRNPH1 HNRPH, HNRPH1 Heterogeneous nuclear ribonucleoprotein H;
Heterogeneous nuclear ribonucleoprotein H, N-terminally processed
 40.8 II 0.78
Q9H8H2 DDX31 Probable ATP-dependent RNA helicase DDX31;
DEAD box protein 31;
Helicain
 40.8 II 1.80
O14776 TCERG1 CA150, TAF2S Transcription elongation regulator 1;
TATA box-binding protein-associated factor 2S;
Transcription factor CA150
 40.9 II 0.87
Q15637 SF1 ZFM1, ZNF162 Splicing factor 1;
Mammalian branch point-binding protein;
Transcription factor ZFM1;
Zinc finger gene in MEN1 locus;
Zinc finger protein 162
 40.9 II 0.93
O75533 SF3B1 SAP155 Splicing factor 3B subunit 1;
Pre-mRNA-splicing factor SF3b 155 kDa subunit;
Spliceosome-associated protein 155
 40.9 II 0.96
Q8TAD8 SNIP1 Smad nuclear-interacting protein 1;
FHA domain-containing protein SNIP1
 40.9 II 1.62
Q92541 RTF1 KIAA0252 RNA polymerase-associated protein RTF1 homolog 40.9 II 1.34
Q9NTZ6 RBM12 HRIHFB2091, KIAA0765 RNA-binding protein 12;
RNA-binding motif protein 12;
SH3/WW domain anchor protein in the nucleus
 40.9 II 0.95
P42696 RBM34 KIAA0117 RNA-binding protein 34;
RNA-binding motif protein 34
 41.1 II 0.97
Q14241 ELOA MSTP059, TCEB3 Elongin-A;
Elongin 110 kDa subunit;
RNA polymerase II transcription factor SIII subunit A1;
SIII p110;
Transcription elongation factor B polypeptide 3
 41.3 II 2.03
Q9H6R0 DHX33 DDX33 ATP-dependent RNA helicase DHX33;
DEAH box protein 33
 41.4 II 1.00
Q9NX07 TRNAU1AP SECP43, TRSPAP1 tRNA selenocysteine 1-associated protein 1;
SECp43;
tRNA selenocysteine-associated protein 1
 41.5 II 0.95
Q14011 CIRBP A18HNRNP, CIRP Cold-inducible RNA-binding protein;
A18 hnRNP;
Glycine-rich RNA-binding protein CIRP
 41.6 II 1.04
O43809 NUDT21 CFIM25, CPSF25, CPSF5 Cleavage and polyadenylation specificity factor subunit 5;
Cleavage and polyadenylation specificity factor 25 kDa subunit;
Cleavage factor Im complex 25 kDa subunit;
Nucleoside diphosphate-linked moiety X motif 21;
Nudix hydrolase 21;
Pre-mRNA cleavage factor Im 68 kDa subunit
 41.6 II 0.89
Q01130 SRSF2 SFRS2 Serine/arginine-rich splicing factor 2;
Protein PR264;
Splicing component, 35 kDa;
Splicing factor SC35;
Splicing factor, arginine/serine-rich 2
 41.6 II 0.97
Q07955 SRSF1 ASF, OK/SW-cl.3, SF2, SF2P33, SFRS1 Serine/arginine-rich splicing factor 1;
Alternative-splicing factor 1;
Splicing factor, arginine/serine-rich 1;
pre-mRNA-splicing factor SF2, P33 subunit
 41.6 II 0.92
Q92522 H1FX Histone H1.10;
Histone H1x
 41.6 II 1.56
Q9BU76 MMTAG2 C1orf35 Multiple myeloma tumor-associated protein 2 41.6 II 1.13