CACTIN
UniProt Accession | Q8WUQ7 UniProt 🔗 |
---|---|
Synonyms | C19orf29 |
UniProt protein names | Splicing factor Cactin;Renal carcinoma antigen NY-REN-24 |
Peak binding time (min) | 47.3 |
Cluster | III |
Cluster membership (corr) | 0.998 |
Peak broadness (1 / std of log2 intensities) | 1.26 |
Cluster expected from GO | IV |
Subcellular localization (Human Protein Atlas) | Nuclear speckles;Nucleoplasm |
Subcellular localization (Human Cell Map) | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus |
RMSE (expected - observed) | 0.36 |
Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of CACTIN in mRNP (BioGRID)
Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
---|---|---|---|---|---|---|---|
Q14562 | DHX8 | 46.2 | III | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: spliceosomal complex II | 1 | 2 |
P12956 | XRCC6 | 47.9 | III | Nucleoplasm | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |
Q9UBU9 | NXF1 | 50.3 | III | Nucleoplasm | NMF result: miscellaneous, SAFE result: nuclear pore | 1 | 1 |
Q99459 | CDC5L | 49.2 | III | Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
P38919 | EIF4A3 | 67.1 | V | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
Q15287 | RNPS1 | 58.0 | IV | Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |