CHORDC1
| UniProt Accession | Q9UHD1 UniProt 🔗 |
|---|---|
| Synonyms | CHP1 |
| UniProt protein names | Cysteine and histidine-rich domain-containing protein 1;CHORD domain-containing protein 1;Protein morgana |
| Peak binding time (min) | 39.0 |
| Cluster | III |
| Cluster membership (corr) | 0.924 |
| Peak broadness (1 / std of log2 intensities) | 2.15 |
| Cluster expected from GO | IV |
| Subcellular localization (Human Protein Atlas) | Cytosol |
| Subcellular localization (Human Cell Map) | NMF result: miscellaneous, SAFE result: - |
| RMSE (expected - observed) | 0.32 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of CHORDC1 in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| P07900 | HSP90AA1 | 48.1 | III | Cytosol | NMF result: no prediction, SAFE result: no prediction | 5 | 4 |
| P08238 | HSP90AB1 | 46.0 | III | Cytosol | NMF result: no prediction, SAFE result: no prediction | 3 | 4 |
| Q9HAV4 | XPO5 | 45.6 | III | Nucleoplasm | NMF result: nucleolus, SAFE result: no prediction | 2 | 1 |
| Q13283 | G3BP1 | 220.8 | VII | Cytosol | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: cytoplasmic ribonucleoprotein granule | 1 | 1 |
| Q96AE4 | FUBP1 | 36.8 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
| P53999 | SUB1 | 43.3 | II | Nucleoli;Nucleus | NMF result: nucleolus, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| P82979 | SARNP | 70.0 | V | Nuclear speckles | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |