CSTF2T
| UniProt Accession | Q9H0L4 UniProt 🔗 |
|---|---|
| Synonyms | KIAA0689 |
| UniProt protein names | Cleavage stimulation factor subunit 2 tau variant;CF-1 64 kDa subunit tau variant;Cleavage stimulation factor 64 kDa subunit tau variant;TauCstF-64 |
| Peak binding time (min) | 14.0 |
| Cluster | I |
| Cluster membership (corr) | 0.996 |
| Peak broadness (1 / std of log2 intensities) | 0.99 |
| Cluster expected from GO | II |
| Subcellular localization (Human Protein Atlas) | Nucleoplasm |
| Subcellular localization (Human Cell Map) | NMF result: actin cytoskeleton, cytosol, SAFE result: no prediction |
| RMSE (expected - observed) | 0.08 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of CSTF2T in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| Q12996 | CSTF3 | 9.6 | I | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 2 | 3 |
| Q05048 | CSTF1 | 22.4 | II | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 2 | 2 |
| Q6UN15 | FIP1L1 | 19.3 | I | Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 2 | 2 |
| P33240 | CSTF2 | 23.7 | II | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: no prediction | 2 | 2 |
| Q01844 | EWSR1 | 36.3 | II | Nucleoli;Nucleus | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
| Q69YN4 | VIRMA | 0.0 | I | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| O95639 | CPSF4 | 36.9 | II | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q9ULX6 | AKAP8L | 39.8 | II | Nuclear speckles | NMF result: miscellaneous, SAFE result: - | 1 | 1 |
| O15042 | U2SURP | 33.1 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |