TSNAX
| UniProt Accession | Q99598 UniProt 🔗 |
|---|---|
| Synonyms | TRAX |
| UniProt protein names | Translin-associated protein X;Translin-associated factor X |
| Peak binding time (min) | 74.9 |
| Cluster | V |
| Cluster membership (corr) | 0.989 |
| Peak broadness (1 / std of log2 intensities) | 2.73 |
| Cluster expected from GO | V |
| Subcellular localization (Human Protein Atlas) | Cytosol;Nucleoplasm |
| Subcellular localization (Human Cell Map) | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: no prediction |
| RMSE (expected - observed) | 0.14 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of TSNAX in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| Q15029 | EFTUD2 | 45.5 | III | Cytosol;Nucleoplasm | NMF result: miscellaneous, SAFE result: spliceosomal complex I | 1 | 2 |
| O75400 | PRPF40A | 39.8 | II | Nuclear speckles | NMF result: nuclear body, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| O95985 | TOP3B | 72.2 | V | Vesicles | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: cytoplasmic ribonucleoprotein granule | 1 | 1 |
| Q9BTL3 | RAMAC | 30.2 | II | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q69YN4 | VIRMA | 0.0 | I | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| P51116 | FXR2 | 171.1 | VII | Cytosol | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: cytoplasmic ribonucleoprotein granule | 1 | 1 |
| Q02040 | AKAP17A | 60.8 | III | Cytosol;Nuclear speckles | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q5BKY9 | FAM133B | 42.8 | II | Nucleoli;Nucleus | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| P14866 | HNRNPL | 42.6 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
| O75340 | PDCD6 | 37.8 | II | Cytosol | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| P51114 | FXR1 | 172.6 | VII | Cytosol | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: no prediction | 1 | 1 |
| O60506 | SYNCRIP | 71.4 | V | Cytosol;Nucleoplasm | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: paraspeckles | 1 | 1 |
| Q07065 | CKAP4 | 40.2 | II | NMF result: nuclear outer membrane-ER membrane network, SAFE result: nuclear outer membrane-ER membrane network | 1 | 1 | |
| O15427 | SLC16A3 | 45.4 | II | Nuclear membrane;Plasma membrane | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q5T280 | SPOUT1 | 0.0 | I | Nucleoli;Nucleus | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |