CCDC59
| UniProt Accession | Q9P031 UniProt 🔗 |
|---|---|
| Synonyms | BR22, HSPC128, TAP26 |
| UniProt protein names | Thyroid transcription factor 1-associated protein 26;Coiled-coil domain-containing protein 59;TTF-1-associated protein BR2 |
| Peak binding time (min) | 42.4 |
| Cluster | II |
| Cluster membership (corr) | 0.995 |
| Peak broadness (1 / std of log2 intensities) | 0.96 |
| Cluster expected from GO | IV |
| Subcellular localization (Human Protein Atlas) | Nucleoli;Nucleus |
| Subcellular localization (Human Cell Map) | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus |
| RMSE (expected - observed) | 0.53 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of CCDC59 in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| P42696 | RBM34 | 41.1 | II | Nucleoli;Nucleus | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q12905 | ILF2 | 48.0 | III | Nucleoli;Nucleus | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q96PV6 | LENG8 | 50.0 | III | Nucleus | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q14146 | URB2 | 5.1 | I | Nucleoli | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q8N5C6 | SRBD1 | 38.5 | III | Cytosol;Mitochondria | NMF result: nucleoplasm, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| Q9BQG0 | MYBBP1A | 54.4 | IV | Nucleoli;Vesicles | NMF result: nucleolus, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| Q03701 | CEBPZ | 52.3 | III | Nucleus;Vesicles | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| O60287 | URB1 | 9.2 | I | Nucleoli fibrillar center | NMF result: nucleolus, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| O60506 | SYNCRIP | 71.4 | V | Cytosol;Nucleoplasm | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: paraspeckles | 1 | 1 |
| P08621 | SNRNP70 | 32.2 | II | Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q5VYS8 | TUT7 | 75.9 | V | Cytosol;Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q14966 | ZNF638 | 47.8 | III | Nucleoplasm;Vesicles | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q96EY7 | PTCD3 | 77.4 | V | Mitochondria | NMF result: mitochondrial matrix, SAFE result: mitochondrial inner membrane, mitochondrial intermembrane space, mitochondrial matrix | 1 | 1 |
| Q8N8A6 | DDX51 | 25.7 | II | Cytosol;Nucleoli;Nucleus | NMF result: nucleoplasm, SAFE result: - | 1 | 1 |
| Q5T280 | SPOUT1 | 0.0 | I | Nucleoli;Nucleus | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| Q9Y2R4 | DDX52 | 52.8 | IV | Nucleoli;Nucleus | NMF result: nucleolus, SAFE result: chromatin, nucleoplasm | 1 | 1 |