USP42
UniProt Accession | Q9H9J4 UniProt 🔗 |
---|---|
Synonyms | |
UniProt protein names | Ubiquitin carboxyl-terminal hydrolase 42;Deubiquitinating enzyme 42;Ubiquitin thioesterase 42;Ubiquitin-specific-processing protease 42 |
Peak binding time (min) | 45.6 |
Cluster | III |
Cluster membership (corr) | 0.999 |
Peak broadness (1 / std of log2 intensities) | 1.12 |
Cluster expected from GO | IV |
Subcellular localization (Human Protein Atlas) | Nucleus |
Subcellular localization (Human Cell Map) | NMF result: no prediction, SAFE result: no prediction |
RMSE (expected - observed) | 0.39 |
Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of USP42 in mRNP (BioGRID)
Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
---|---|---|---|---|---|---|---|
Q69YN4 | VIRMA | 0.0 | I | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
Q9NXF1 | TEX10 | 94.1 | V | NMF result: nucleolus, SAFE result: chromatin, nucleoplasm | 1 | 1 | |
Q9H6S0 | YTHDC2 | 171.0 | VII | Cytoplasmic bodies;Nuclear bodies;Nucleoplasm | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: no prediction | 1 | 1 |
Q9UNQ2 | DIMT1 | 51.1 | III | Cytosol;Nucleoli;Nucleus | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
Q9UQ35 | SRRM2 | 42.5 | III | Nuclear speckles | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |