NGDN
| UniProt Accession | Q8NEJ9 UniProt 🔗 |
|---|---|
| Synonyms | C14orf120 |
| UniProt protein names | Neuroguidin;Centromere accumulated nuclear protein 1;EIF4E-binding protein |
| Peak binding time (min) | 55.6 |
| Cluster | IV |
| Cluster membership (corr) | 0.998 |
| Peak broadness (1 / std of log2 intensities) | 0.92 |
| Cluster expected from GO | IV |
| Subcellular localization (Human Protein Atlas) | Mitochondria;Nucleoli;Nucleus |
| Subcellular localization (Human Cell Map) | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus |
| RMSE (expected - observed) | 0.05 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of NGDN in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| Q9NY61 | AATF | 53.8 | IV | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 2 | 2 | |
| P09429 | HMGB1 | 49.8 | III | Nucleus | NMF result: nucleoplasm, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| Q96ME7 | ZNF512 | 45.2 | III | Nucleus | NMF result: nucleoplasm, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| Q86VM9 | ZC3H18 | 39.6 | II | Nuclear speckles | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| P53985 | SLC16A1 | 45.6 | II | Cell Junctions;Plasma membrane | NMF result: plasma membrane, SAFE result: cell junction, plasma membrane | 1 | 1 |
| Q5C9Z4 | NOM1 | 54.1 | IV | Nucleoli | NMF result: nucleolus, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q8TAD8 | SNIP1 | 40.9 | II | Cytosol;Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| P55081 | MFAP1 | 43.9 | II | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 | |
| Q12873 | CHD3 | 52.4 | IV | Microtubule organizing center;Nucleoli;Nucleus | NMF result: nucleoplasm, SAFE result: chromatin, nucleoplasm | 1 | 1 |