ALKBH5
| UniProt Accession | Q6P6C2 UniProt 🔗 |
|---|---|
| Synonyms | ABH5, OFOXD1 |
| UniProt protein names | RNA demethylase ALKBH5;Alkylated DNA repair protein alkB homolog 5;Alpha-ketoglutarate-dependent dioxygenase alkB homolog 5 |
| Peak binding time (min) | 62.7 |
| Cluster | IV |
| Cluster membership (corr) | 0.996 |
| Peak broadness (1 / std of log2 intensities) | 1.38 |
| Cluster expected from GO | IV |
| Subcellular localization (Human Protein Atlas) | Cytosol;Golgi apparatus;Nucleoplasm |
| Subcellular localization (Human Cell Map) | NMF result: chromatin, SAFE result: chromatin, nucleoplasm |
| RMSE (expected - observed) | 0.17 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of ALKBH5 in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| P12956 | XRCC6 | 47.9 | III | Nucleoplasm | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| P31943 | HNRNPH1 | 40.8 | II | Cytosol;Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
| Q15717 | ELAVL1 | 46.3 | III | Cytosol;Nucleoli;Nucleus | NMF result: miscellaneous, SAFE result: paraspeckles | 1 | 1 |