SCAMP3
| UniProt Accession | O14828 UniProt 🔗 |
|---|---|
| Synonyms | C1orf3, PROPIN1 |
| UniProt protein names | Secretory carrier-associated membrane protein 3 |
| Peak binding time (min) | 45.6 |
| Cluster | III |
| Cluster membership (corr) | 0.999 |
| Peak broadness (1 / std of log2 intensities) | 1.29 |
| Cluster expected from GO | III |
| Subcellular localization (Human Protein Atlas) | Vesicles |
| Subcellular localization (Human Cell Map) | NMF result: endosome, lysosome, SAFE result: endosome, lysosome |
| RMSE (expected - observed) | 0.10 |
| Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of SCAMP3 in mRNP (BioGRID)
| Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
|---|---|---|---|---|---|---|---|
| Q9NZ01 | TECR | 43.4 | III | Endoplasmic reticulum | NMF result: mitochondrial outer membrane, peroxisome, SAFE result: - | 1 | 1 |
| Q69YN4 | VIRMA | 0.0 | I | Nuclear bodies;Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
| Q9GZT3 | SLIRP | 71.4 | V | Mitochondria | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| A0AV96 | RBM47 | 58.8 | IV | Cytosol;Nucleoplasm | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: cytoplasmic ribonucleoprotein granule | 1 | 1 |
| Q8IWZ8 | SUGP1 | 32.9 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: chromatin, nucleoplasm | 1 | 1 |
| Q01085 | TIAL1 | 46.1 | II | Nucleus;Vesicles | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
| P27694 | RPA1 | 45.5 | III | Nucleoplasm | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |