TRMT6
UniProt Accession | Q9UJA5 UniProt 🔗 |
---|---|
Synonyms | CGI-09, KIAA1153, TRM6 |
UniProt protein names | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6;mRNA methyladenosine-N(1)-methyltransferase non-catalytic subunit TRM6;tRNA(m1A58)-methyltransferase subunit TRM6 |
Peak binding time (min) | 58.6 |
Cluster | IV |
Cluster membership (corr) | 0.996 |
Peak broadness (1 / std of log2 intensities) | 1.51 |
Cluster expected from GO | IV |
Subcellular localization (Human Protein Atlas) | Nucleus |
Subcellular localization (Human Cell Map) | NMF result: chromatin, SAFE result: chromatin, nucleoplasm |
RMSE (expected - observed) | 0.16 |
Link to current annotations (QuickGO) | QuickGO 🔗 |
mRNA binding dynamics
Gene Ontology based expectation (GO 2021-09-01)
Protein interactors of TRMT6 in mRNP (BioGRID)
Master Protein UniProt | Gene Symbol | Peak binding time (min) | Cluster | Subcellular localization (Human Protein Atlas) | Subcellular localization (Human Cell Map) | Number of evidences (experiment types) | Number of evidences (publications) |
---|---|---|---|---|---|---|---|
O95793 | STAU1 | 111.0 | VI | Cytosol | NMF result: cytoplasmic ribonucleoprotein granule, SAFE result: no prediction | 1 | 1 |
P17844 | DDX5 | 40.0 | II | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |
P07814 | EPRS | 29.5 | II | Cytosol | NMF result: actin cytoskeleton, cytosol, SAFE result: cell junction, plasma membrane | 1 | 1 |
P42285 | MTREX | 73.4 | V | Nucleus | NMF result: chromatin, SAFE result: - | 1 | 1 |
Q96G46 | DUS3L | 48.8 | III | Cytosol;Nucleoplasm | NMF result: no prediction, SAFE result: no prediction | 1 | 1 |
Q13573 | SNW1 | 51.8 | III | Nucleoplasm | NMF result: nuclear body, SAFE result: splicing speckles, nucleolus | 1 | 1 |
P05455 | SSB | 45.1 | III | Nucleoplasm | NMF result: chromatin, SAFE result: chromatin, nucleoplasm | 1 | 1 |
O43390 | HNRNPR | 48.0 | III | Nucleoplasm | NMF result: nuclear body, SAFE result: paraspeckles | 1 | 1 |