RBM38


UniProt Accession Q9H0Z9 UniProt 🔗
Synonyms RNPC1, SEB4
UniProt protein names RNA-binding protein 38;
CLL-associated antigen KW-5;
HSRNASEB;
RNA-binding motif protein 38;
RNA-binding region-containing protein 1;
ssDNA-binding protein SEB4
Peak binding time (min) 57.5
Cluster IV
Cluster membership (corr) 0.983
Peak broadness (1 / std of log2 intensities) 2.53
Cluster expected from GO IV
Subcellular localization (Human Protein Atlas) Cytosol;Nucleoplasm
Subcellular localization (Human Cell Map) NMF result: no prediction, SAFE result: no prediction
RMSE (expected - observed) 0.35
Link to current annotations (QuickGO) QuickGO 🔗

mRNA binding dynamics


Gene Ontology based expectation (GO 2021-09-01)


Protein interactors of RBM38 in mRNP (BioGRID)


Master Protein UniProt Gene Symbol Peak binding time (min) Cluster Subcellular localization (Human Protein Atlas) Subcellular localization (Human Cell Map) Number of evidences (experiment types) Number of evidences (publications)
O43251 RBFOX2 45.8 III Nucleoplasm NMF result: nuclear body, SAFE result: paraspeckles 1 2
Q96EY7 PTCD3 77.4 V Mitochondria NMF result: mitochondrial matrix, SAFE result: mitochondrial inner membrane, mitochondrial intermembrane space, mitochondrial matrix 1 1
P31943 HNRNPH1 40.8 II Cytosol;Nucleoplasm NMF result: nuclear body, SAFE result: paraspeckles 1 1